Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis

Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor 2020-11 Association for Computational Linguistics Online text conference publication louhi-2020-international 10.18653/v1/2020.louhi-1.0 https://aclanthology.org/2020.louhi-1.0/ The Impact of De-identification on Downstream Named Entity Recognition in Clinical Text Hanna Berg author Aron Henriksson author Hercules Dalianis author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication berg-etal-2020-impact 10.18653/v1/2020.louhi-1.1 https://aclanthology.org/2020.louhi-1.1/ 2020-11 1 11 Simple Hierarchical Multi-Task Neural End-To-End Entity Linking for Biomedical Text Maciej Wiatrak author Juha Iso-Sipila author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication wiatrak-iso-sipila-2020-simple 10.18653/v1/2020.louhi-1.2 https://aclanthology.org/2020.louhi-1.2/ 2020-11 12 17 Medical Concept Normalization in User-Generated Texts by Learning Target Concept Embeddings Katikapalli Subramanyam Kalyan author Sivanesan Sangeetha author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication kalyan-sangeetha-2020-medical 10.18653/v1/2020.louhi-1.3 https://aclanthology.org/2020.louhi-1.3/ 2020-11 18 23 Not a cute stroke: Analysis of Rule- and Neural Network-based Information Extraction Systems for Brain Radiology Reports Andreas Grivas author Beatrice Alex author Claire Grover author Richard Tobin author William Whiteley author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication grivas-etal-2020-cute 10.18653/v1/2020.louhi-1.4 https://aclanthology.org/2020.louhi-1.4/ 2020-11 24 37 GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines Florian Borchert author Christina Lohr author Luise Modersohn author Thomas Langer author Markus Follmann author Jan Philipp Sachs author Udo Hahn author Matthieu-P. Schapranow author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication borchert-etal-2020-ggponc 10.18653/v1/2020.louhi-1.5 https://aclanthology.org/2020.louhi-1.5/ 2020-11 38 48 Normalization of Long-tail Adverse Drug Reactions in Social Media Emmanouil Manousogiannis author Sepideh Mesbah author Alessandro Bozzon author Robert-Jan Sips author Zoltan Szlanik author Selene Baez Santamaria author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication manousogiannis-etal-2020-normalization 10.18653/v1/2020.louhi-1.6 https://aclanthology.org/2020.louhi-1.6/ 2020-11 49 58 Evaluation of Machine Translation Methods applied to Medical Terminologies Konstantinos Skianis author Yann Briand author Florent Desgrippes author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication skianis-etal-2020-evaluation 10.18653/v1/2020.louhi-1.7 https://aclanthology.org/2020.louhi-1.7/ 2020-11 59 69 Information retrieval for animal disease surveillance: a pattern-based approach. Sarah Valentin author Mathieu Roche author Renaud Lancelot author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication valentin-etal-2020-information 10.18653/v1/2020.louhi-1.8 https://aclanthology.org/2020.louhi-1.8/ 2020-11 70 78 Multitask Learning of Negation and Speculation using Transformers Aditya Khandelwal author Benita Kathleen Britto author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication khandelwal-britto-2020-multitask 10.18653/v1/2020.louhi-1.9 https://aclanthology.org/2020.louhi-1.9/ 2020-11 79 87 Biomedical Event Extraction as Multi-turn Question Answering Xing David Wang author Leon Weber author Ulf Leser author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication wang-etal-2020-biomedical 10.18653/v1/2020.louhi-1.10 https://aclanthology.org/2020.louhi-1.10/ 2020-11 88 96 An efficient representation of chronological events in medical texts Andrey Kormilitzin author Nemanja Vaci author Qiang Liu author Hao Ni author Goran Nenadic author Alejo Nevado-Holgado author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication kormilitzin-etal-2020-efficient 10.18653/v1/2020.louhi-1.11 https://aclanthology.org/2020.louhi-1.11/ 2020-11 97 103 Defining and Learning Refined Temporal Relations in the Clinical Narrative Kristin Wright-Bettner author Chen Lin author Timothy Miller author Steven Bethard author Dmitriy Dligach author Martha Palmer author James H Martin author Guergana Savova author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication wright-bettner-etal-2020-defining 10.18653/v1/2020.louhi-1.12 https://aclanthology.org/2020.louhi-1.12/ 2020-11 104 114 Context-Aware Automatic Text Simplification of Health Materials in Low-Resource Domains Tarek Sakakini author Jong Yoon Lee author Aditya Duri author Renato F.L. Azevedo author Victor Sadauskas author Kuangxiao Gu author Suma Bhat author Dan Morrow author James Graumlich author Saqib Walayat author Mark Hasegawa-Johnson author Thomas Huang author Ann Willemsen-Dunlap author Donald Halpin author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication sakakini-etal-2020-context 10.18653/v1/2020.louhi-1.13 https://aclanthology.org/2020.louhi-1.13/ 2020-11 115 126 Identifying Personal Experience Tweets of Medication Effects Using Pre-trained RoBERTa Language Model and Its Updating Minghao Zhu author Youzhe Song author Ge Jin author Keyuan Jiang author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication zhu-etal-2020-identifying 10.18653/v1/2020.louhi-1.14 https://aclanthology.org/2020.louhi-1.14/ 2020-11 127 137 Detecting Foodborne Illness Complaints in Multiple Languages Using English Annotations Only Ziyi Liu author Giannis Karamanolakis author Daniel Hsu author Luis Gravano author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication liu-etal-2020-detecting 10.18653/v1/2020.louhi-1.15 https://aclanthology.org/2020.louhi-1.15/ 2020-11 138 146 Detection of Mental Health from Reddit via Deep Contextualized Representations Zhengping Jiang author Sarah Ita Levitan author Jonathan Zomick author Julia Hirschberg author 2020-11 text Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis Eben Holderness editor Antonio Jimeno Yepes editor Alberto Lavelli editor Anne-Lyse Minard editor James Pustejovsky editor Fabio Rinaldi editor Association for Computational Linguistics Online conference publication jiang-etal-2020-detection 10.18653/v1/2020.louhi-1.16 https://aclanthology.org/2020.louhi-1.16/ 2020-11 147 156