Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016)

Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor 2016-12 The COLING 2016 Organizing Committee Osaka, Japan text conference publication ws-2016-building https://aclanthology.org/W16-5100/ Cancer Hallmark Text Classification Using Convolutional Neural Networks Simon Baker author Anna Korhonen author Sampo Pyysalo author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication baker-etal-2016-cancer https://aclanthology.org/W16-5101/ 2016-12 1 9 Learning Orthographic Features in Bi-directional LSTM for Biomedical Named Entity Recognition Nut Limsopatham author Nigel Collier author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication limsopatham-collier-2016-learning https://aclanthology.org/W16-5102/ 2016-12 10 19 Building Content-driven Entity Networks for Scarce Scientific Literature using Content Information Reinald Kim Amplayo author Min Song author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication amplayo-song-2016-building https://aclanthology.org/W16-5103/ 2016-12 20 29 Named Entity Recognition in Swedish Health Records with Character-Based Deep Bidirectional LSTMs Simon Almgren author Sean Pavlov author Olof Mogren author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication almgren-etal-2016-named https://aclanthology.org/W16-5104/ 2016-12 30 39 Entity-Supported Summarization of Biomedical Abstracts Frederik Schulze author Mariana Neves author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication schulze-neves-2016-entity https://aclanthology.org/W16-5105/ 2016-12 40 49 Fully unsupervised low-dimensional representation of adverse drug reaction events through distributional semantics Alicia Pérez author Arantza Casillas author Koldo Gojenola author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication perez-etal-2016-fully https://aclanthology.org/W16-5106/ 2016-12 50 59 A Dataset for ICD-10 Coding of Death Certificates: Creation and Usage Thomas Lavergne author Aurélie Névéol author Aude Robert author Cyril Grouin author Grégoire Rey author Pierre Zweigenbaum author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication lavergne-etal-2016-dataset https://aclanthology.org/W16-5107/ 2016-12 60 69 A Corpus of Tables in Full-Text Biomedical Research Publications Tatyana Shmanina author Ingrid Zukerman author Ai Lee Cheam author Thomas Bochynek author Lawrence Cavedon author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication shmanina-etal-2016-corpus https://aclanthology.org/W16-5108/ 2016-12 70 79 Supervised classification of end-of-lines in clinical text with no manual annotation Pierre Zweigenbaum author Cyril Grouin author Thomas Lavergne author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication zweigenbaum-etal-2016-supervised https://aclanthology.org/W16-5109/ 2016-12 80 88 BioDCA Identifier: A System for Automatic Identification of Discourse Connective and Arguments from Biomedical Text Sindhuja Gopalan author Sobha Lalitha Devi author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication gopalan-lalitha-devi-2016-biodca https://aclanthology.org/W16-5110/ 2016-12 89 98 Data, tools and resources for mining social media drug chatter Abeed Sarker author Graciela Gonzalez author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication sarker-gonzalez-2016-data https://aclanthology.org/W16-5111/ 2016-12 99 107 Detection of Text Reuse in French Medical Corpora Eva D’hondt author Cyril Grouin author Aurélie Névéol author Efstathios Stamatatos author Pierre Zweigenbaum author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication dhondt-etal-2016-detection https://aclanthology.org/W16-5112/ 2016-12 108 114 Negation Detection in Clinical Reports Written in German Viviana Cotik author Roland Roller author Feiyu Xu author Hans Uszkoreit author Klemens Budde author Danilo Schmidt author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication cotik-etal-2016-negation https://aclanthology.org/W16-5113/ 2016-12 115 124 Scoring Disease-Medication Associations using Advanced NLP, Machine Learning, and Multiple Content Sources Bharath Dandala author Murthy Devarakonda author Mihaela Bornea author Christopher Nielson author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication dandala-etal-2016-scoring https://aclanthology.org/W16-5114/ 2016-12 125 133 Author Name Disambiguation in MEDLINE Based on Journal Descriptors and Semantic Types Dina Vishnyakova author Raul Rodriguez-Esteban author Khan Ozol author Fabio Rinaldi author 2016-12 text Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) Sophia Ananiadou editor Riza Batista-Navarro editor Kevin Bretonnel Cohen editor Dina Demner-Fushman editor Paul Thompson editor The COLING 2016 Organizing Committee Osaka, Japan conference publication vishnyakova-etal-2016-author https://aclanthology.org/W16-5115/ 2016-12 134 142