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    <abstract>This paper describes the submission of the TALP-UPC team to the Problem List Summarization task from the BioNLP 2023 workshop. This task consists of automatically extracting a list of health issues from the e-health medical record of a given patient. Our submission combines additional steps of data annotationwith finetuning of BERT pre-trained language models. Our experiments focus on the impact of finetuning on different datasets as well as the addition of data augmentation techniques to delay overfitting.</abstract>
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%0 Conference Proceedings
%T TALP-UPC at ProbSum 2023: Fine-tuning and Data Augmentation Strategies for NER
%A Torrero, Neil
%A Sant, Gerard
%A Escolano, Carlos
%Y Demner-fushman, Dina
%Y Ananiadou, Sophia
%Y Cohen, Kevin
%S The 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks
%D 2023
%8 July
%I Association for Computational Linguistics
%C Toronto, Canada
%F torrero-etal-2023-talp
%X This paper describes the submission of the TALP-UPC team to the Problem List Summarization task from the BioNLP 2023 workshop. This task consists of automatically extracting a list of health issues from the e-health medical record of a given patient. Our submission combines additional steps of data annotationwith finetuning of BERT pre-trained language models. Our experiments focus on the impact of finetuning on different datasets as well as the addition of data augmentation techniques to delay overfitting.
%R 10.18653/v1/2023.bionlp-1.48
%U https://aclanthology.org/2023.bionlp-1.48
%U https://doi.org/10.18653/v1/2023.bionlp-1.48
%P 497-502

Markdown (Informal)

[TALP-UPC at ProbSum 2023: Fine-tuning and Data Augmentation Strategies for NER](https://aclanthology.org/2023.bionlp-1.48) (Torrero et al., BioNLP 2023)

• TALP-UPC at ProbSum 2023: Fine-tuning and Data Augmentation Strategies for NER (Torrero et al., BioNLP 2023)

ACL

• Neil Torrero, Gerard Sant, and Carlos Escolano. 2023. TALP-UPC at ProbSum 2023: Fine-tuning and Data Augmentation Strategies for NER. In The 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, pages 497–502, Toronto, Canada. Association for Computational Linguistics.