@inproceedings{du-etal-2024-mrc-based,
title = "{MRC}-based Nested Medical {NER} with Co-prediction and Adaptive Pre-training",
author = "Du, Xiaojing and
Zhao, Hanjie and
Xing, Danyan and
Jia, Yuxiang and
Zan, Hongying",
editor = "Calzolari, Nicoletta and
Kan, Min-Yen and
Hoste, Veronique and
Lenci, Alessandro and
Sakti, Sakriani and
Xue, Nianwen",
booktitle = "Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation (LREC-COLING 2024)",
month = may,
year = "2024",
address = "Torino, Italia",
publisher = "ELRA and ICCL",
url = "https://aclanthology.org/2024.lrec-main.1019",
pages = "11669--11679",
abstract = "In medical information extraction, medical Named Entity Recognition (NER) is indispensable, playing a crucial role in developing medical knowledge graphs, enhancing medical question-answering systems, and analyzing electronic medical records. The challenge in medical NER arises from the complex nested structures and sophisticated medical terminologies, distinguishing it from its counterparts in traditional domains. In response to these complexities, we propose a medical NER model based on Machine Reading Comprehension (MRC), which uses a task-adaptive pre-training strategy to improve the model{'}s capability in the medical field. Meanwhile, our model introduces multiple word-pair embeddings and multi-granularity dilated convolution to enhance the model{'}s representation ability and uses a combined predictor of Biaffine and MLP to improve the model{'}s recognition performance. Experimental evaluations conducted on the CMeEE, a benchmark for Chinese nested medical NER, demonstrate that our proposed model outperforms the compared state-of-the-art (SOTA) models.",
}
<?xml version="1.0" encoding="UTF-8"?>
<modsCollection xmlns="http://www.loc.gov/mods/v3">
<mods ID="du-etal-2024-mrc-based">
<titleInfo>
<title>MRC-based Nested Medical NER with Co-prediction and Adaptive Pre-training</title>
</titleInfo>
<name type="personal">
<namePart type="given">Xiaojing</namePart>
<namePart type="family">Du</namePart>
<role>
<roleTerm authority="marcrelator" type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Hanjie</namePart>
<namePart type="family">Zhao</namePart>
<role>
<roleTerm authority="marcrelator" type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Danyan</namePart>
<namePart type="family">Xing</namePart>
<role>
<roleTerm authority="marcrelator" type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Yuxiang</namePart>
<namePart type="family">Jia</namePart>
<role>
<roleTerm authority="marcrelator" type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Hongying</namePart>
<namePart type="family">Zan</namePart>
<role>
<roleTerm authority="marcrelator" type="text">author</roleTerm>
</role>
</name>
<originInfo>
<dateIssued>2024-05</dateIssued>
</originInfo>
<typeOfResource>text</typeOfResource>
<relatedItem type="host">
<titleInfo>
<title>Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation (LREC-COLING 2024)</title>
</titleInfo>
<name type="personal">
<namePart type="given">Nicoletta</namePart>
<namePart type="family">Calzolari</namePart>
<role>
<roleTerm authority="marcrelator" type="text">editor</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Min-Yen</namePart>
<namePart type="family">Kan</namePart>
<role>
<roleTerm authority="marcrelator" type="text">editor</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Veronique</namePart>
<namePart type="family">Hoste</namePart>
<role>
<roleTerm authority="marcrelator" type="text">editor</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Alessandro</namePart>
<namePart type="family">Lenci</namePart>
<role>
<roleTerm authority="marcrelator" type="text">editor</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Sakriani</namePart>
<namePart type="family">Sakti</namePart>
<role>
<roleTerm authority="marcrelator" type="text">editor</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Nianwen</namePart>
<namePart type="family">Xue</namePart>
<role>
<roleTerm authority="marcrelator" type="text">editor</roleTerm>
</role>
</name>
<originInfo>
<publisher>ELRA and ICCL</publisher>
<place>
<placeTerm type="text">Torino, Italia</placeTerm>
</place>
</originInfo>
<genre authority="marcgt">conference publication</genre>
</relatedItem>
<abstract>In medical information extraction, medical Named Entity Recognition (NER) is indispensable, playing a crucial role in developing medical knowledge graphs, enhancing medical question-answering systems, and analyzing electronic medical records. The challenge in medical NER arises from the complex nested structures and sophisticated medical terminologies, distinguishing it from its counterparts in traditional domains. In response to these complexities, we propose a medical NER model based on Machine Reading Comprehension (MRC), which uses a task-adaptive pre-training strategy to improve the model’s capability in the medical field. Meanwhile, our model introduces multiple word-pair embeddings and multi-granularity dilated convolution to enhance the model’s representation ability and uses a combined predictor of Biaffine and MLP to improve the model’s recognition performance. Experimental evaluations conducted on the CMeEE, a benchmark for Chinese nested medical NER, demonstrate that our proposed model outperforms the compared state-of-the-art (SOTA) models.</abstract>
<identifier type="citekey">du-etal-2024-mrc-based</identifier>
<location>
<url>https://aclanthology.org/2024.lrec-main.1019</url>
</location>
<part>
<date>2024-05</date>
<extent unit="page">
<start>11669</start>
<end>11679</end>
</extent>
</part>
</mods>
</modsCollection>
%0 Conference Proceedings
%T MRC-based Nested Medical NER with Co-prediction and Adaptive Pre-training
%A Du, Xiaojing
%A Zhao, Hanjie
%A Xing, Danyan
%A Jia, Yuxiang
%A Zan, Hongying
%Y Calzolari, Nicoletta
%Y Kan, Min-Yen
%Y Hoste, Veronique
%Y Lenci, Alessandro
%Y Sakti, Sakriani
%Y Xue, Nianwen
%S Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation (LREC-COLING 2024)
%D 2024
%8 May
%I ELRA and ICCL
%C Torino, Italia
%F du-etal-2024-mrc-based
%X In medical information extraction, medical Named Entity Recognition (NER) is indispensable, playing a crucial role in developing medical knowledge graphs, enhancing medical question-answering systems, and analyzing electronic medical records. The challenge in medical NER arises from the complex nested structures and sophisticated medical terminologies, distinguishing it from its counterparts in traditional domains. In response to these complexities, we propose a medical NER model based on Machine Reading Comprehension (MRC), which uses a task-adaptive pre-training strategy to improve the model’s capability in the medical field. Meanwhile, our model introduces multiple word-pair embeddings and multi-granularity dilated convolution to enhance the model’s representation ability and uses a combined predictor of Biaffine and MLP to improve the model’s recognition performance. Experimental evaluations conducted on the CMeEE, a benchmark for Chinese nested medical NER, demonstrate that our proposed model outperforms the compared state-of-the-art (SOTA) models.
%U https://aclanthology.org/2024.lrec-main.1019
%P 11669-11679
Markdown (Informal)
[MRC-based Nested Medical NER with Co-prediction and Adaptive Pre-training](https://aclanthology.org/2024.lrec-main.1019) (Du et al., LREC-COLING 2024)
ACL