Attention Amnesia in Hybrid LLMs: When CoT Fine-Tuning Breaks Long-Range Recall, and How to Fix It

Xinyu Zhou, Boyu Zhu, Yi Xu, Zhiwei Li, Yingfa Chen, Huiming Wang, Zhijiang Guo


Abstract
Chain-of-thought (CoT) supervised fine-tuning (SFT) is widely adopted to improve reasoning ability, yet we find that it systematically degrades long-context recall in hybrid linear-attention models. Across architectures including HypeNet and Jet-Nemotron, retrieval performance on Needle-In-A-Haystack (NIAH) deteriorates substantially after CoT-SFT, and the degradation becomes more severe under harder retrieval settings and longer context windows. For example, HypeNet-9B on NIAH-S2@256K decreases from 67.2% to 9.4%. We attribute this to CoT-SFT biasing attention gradients toward short-range patterns, disrupting query-key projections (WQ,WK) that are responsible for long-range routing. Motivated by this observation, we propose **QK-Restore**, a training-free method that restores only WQ and WK from the pre-SFT checkpoint while preserving all other post-SFT parameters. We further introduce a Procrustes variant to balance routing preservation and reasoning adaptation. Across architectures, **QK-Restore** consistently restores long-context capability at zero training cost while preserving reasoning performance; for instance, on HypeNet-5B it improves S3@256K from 65.4% to 76.4% while maintaining strong reasoning performance.
Anthology ID:
2026.emnlp-main.816
Volume:
Proceedings of the 2026 Conference on Empirical Methods in Natural Language Processing
Month:
October
Year:
2026
Address:
Budapest, Hungary
Editors:
Hung-Yi Lee, Sunipa Dev, Jessy Li, Desmond Elliott
Venue:
EMNLP
SIG:
SIGDAT
Publisher:
Association for Computational Linguistics
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Pages:
18996–19013
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URL:
https://aclanthology.org/2026.emnlp-main.816/
DOI:
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Cite (ACL):
Xinyu Zhou, Boyu Zhu, Yi Xu, Zhiwei Li, Yingfa Chen, Huiming Wang, and Zhijiang Guo. 2026. Attention Amnesia in Hybrid LLMs: When CoT Fine-Tuning Breaks Long-Range Recall, and How to Fix It. In Proceedings of the 2026 Conference on Empirical Methods in Natural Language Processing, pages 18996–19013, Budapest, Hungary. Association for Computational Linguistics.
Cite (Informal):
Attention Amnesia in Hybrid LLMs: When CoT Fine-Tuning Breaks Long-Range Recall, and How to Fix It (Zhou et al., EMNLP 2026)
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https://aclanthology.org/2026.emnlp-main.816.pdf