TRIS: A Tri-Layer Retrieval Integrity Sieve Against Knowledge Poisoning

Muhaimin Bin Munir, Akib Jawad Ononto, Nazia Shehnaz Joynab, Bhavani Thuraisingham, Latifur Khan


Abstract
Retrieval-Augmented Generation (RAG) grounds large language models in external corpora, but implicit trust in retrieved documents creates a critical attack surface: PoisonedRAG shows that a handful of crafted passages can dominate dense retrieval and steer generation toward attacker-chosen answers. We present the Tri-Layer Sieve, a middleware defense that sanitizes retrieved evidence through cross-embedding-space clustering with an independent judge model, structural filtering of trigger–payload artifacts, and LLM consistency verification. The design exploits a key weakness of retrieval-stage poisoning: a single document must satisfy one embedding geometry, one internal Trigger–Payload structure, and one generation objective — rarely all three simultaneously, a fragility that persists even against an adaptive attacker who paraphrases around it. On Natural Questions, HotpotQA, and MS-MARCO with Contriever retrieval (k=50), the Sieve reduces black-box Attack Success Rate from 67.0/87.0/64.0% to 3.0/14.0/4.0%, mitigates white-box HotFlip attacks from ∼74% to 27.8% on NQ with Layer 3 enabled, and drives poisoned-document MRR to 0.000, while restoring clean accuracy from 13–33% under attack to 58–76%. Under an architecture-aware adversary who paraphrases triggers to evade the structural filter, enabling the consistency layer halves adaptive ASR (32.0% → 15.0% on NQ) while raising clean accuracy by 18 points, at an added latency of ∼\!16–19 s/query under live retrieval.
Anthology ID:
2026.findings-emnlp.2122
Volume:
Findings of the Association for Computational Linguistics: EMNLP 2026
Month:
October
Year:
2026
Address:
Budapest, Hungary
Editors:
Hung-Yi Lee, Sunipa Dev, Jessy Li, Desmond Elliott
Venue:
Findings
SIG:
SIGDAT
Publisher:
Association for Computational Linguistics
Note:
Pages:
45250–45264
Language:
URL:
https://aclanthology.org/2026.findings-emnlp.2122/
DOI:
10.18653/2026.findings-emnlp.2122
Bibkey:
Cite (ACL):
Muhaimin Bin Munir, Akib Jawad Ononto, Nazia Shehnaz Joynab, Bhavani Thuraisingham, and Latifur Khan. 2026. TRIS: A Tri-Layer Retrieval Integrity Sieve Against Knowledge Poisoning. In Findings of the Association for Computational Linguistics: EMNLP 2026, pages 45250–45264, Budapest, Hungary. Association for Computational Linguistics.
Cite (Informal):
TRIS: A Tri-Layer Retrieval Integrity Sieve Against Knowledge Poisoning (Munir et al., Findings 2026)
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PDF:
https://aclanthology.org/2026.findings-emnlp.2122.pdf