Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications (NLPBA/BioNLP)

Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications (NLPBA/BioNLP) Recognizing Names in Biomedical Texts using Hidden Markov Model and SVM plus Sigmoid GuoDong Zhou Using Argumentation to Retrieve Articles with Similar Citations from MEDLINE Imad Tbahriti Christine Chichester Frédérique Lisacek Patrick Ruch Analysis of Link Grammar on Biomedical Dependency Corpus Targeted at Protein-Protein Interactions Pyysalo Sampo Filip Ginter Tapio Pahikkala Jorma Boberg Jouni Järvinen Tapio Salakoski Jeppe Koivula Discovering Patterns to Extract Protein-Protein Interactions from Full Biomedical Texts Minlie Huang Xiaoyan Zhu Donald G. Payan Kunbin Qu Ming Li Zone Identification in Biology Articles as a Basis for Information Extraction Yoko Mizuta Nigel Collier Assessing the Correlation between Contextual Patterns and Biological Entity Tagging M. Krallinger M. Padrón C. Blaschke A. Valencia Event-Based Information Extraction for the Biomedical Domain: the Caderige Project Erick Alphonse Sophie Aubin Philippe Bessiéres Gilles Bisson Thierry Hamon Sandrine Lagarrigue Adeline Nazarenko Alaine-Pierre Manine Claire Nédellec Mohamed Ould Abdel Vetah Thierry Poibeau Davy Weissenbacher Distributed Modules for Text Annotation and IE Applied to the Biomedical Domain Harald Kirsch Dietrich Rebholz-Schuhmann Support Vector Machine Approach to Extracting Gene References into Function from Biological Documents Chih Lee Wen-Juan Hou Hsin-Hsi Chen Improving the Identification of Non-Anaphoric it using Support Vector Machines José Carlos Clemente Litrán Kenji Satou Kentaro Torisawa Creating a Test Corpus of Clinical Notes Manually Tagged for Part-of-Speech Information Serguei Pakhomov Anni Coden Christopher Chute Classification from Full Text: A Comparison of Canonical Sections of Scientific Papers Gail Sinclair Bonnie Webber Introduction to the Bio-entity Recognition Task at JNLPBA Nigel Collier Jin-Dong Kim Incorporating Lexical Knowledge into Biomedical NE Recognition Kyung-Mi Park Seon-Ho Kim Ki-Joong Lee Do-Gil Lee Hae-Chang Rim Annotating Multiple Types of Biomedical Entities: A Single Word Classification Approach Chih Lee Wen-Juan Hou Hsin-Hsi Chen Named Entity Recognition in Biomedical Texts using an HMM Model Shaojun Zhao Exploiting Context for Biomedical Entity Recognition: From Syntax to the Web Jenny Finkel Shipra Dingare Huy Nguyen Malvina Nissim Christopher Manning Gail Sinclair Adapting an NER-System for German to the Biomedical Domain Marc Rössler Exploring Deep Knowledge Resources in Biomedical Name Recognition Zhou GuoDong Su Jian POSBIOTM-NER in the Shared Task of BioNLP/NLPBA2004 Yu Song Eunju Kim Gary Geunbae Lee Byoung-kee Yi Biomedical Named Entity Recognition using Conditional Random Fields and Rich Feature Sets Burr Settles