<?xml version="1.0" encoding="UTF-8" ?>
<volume id="W14">
  <paper id="3400">
    <title>Proceedings of BioNLP 2014</title>
    <editor><first>Kevin</first><last>Cohen</last></editor>
    <editor><first>Dina</first><last>Demner-Fushman</last></editor>
    <editor><first>Sophia</first><last>Ananiadou</last></editor>
    <editor><first>Jun-ichi</first><last>Tsujii</last></editor>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <url>http://www.aclweb.org/anthology/W14-34</url>
    <bibtype>book</bibtype>
    <bibkey>W14-34:2014</bibkey>
  </paper>

  <paper id="3401">
    <title>Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses</title>
    <author><first>Tasnia</first><last>Tahsin</last></author>
    <author><first>Robert</first><last>Rivera</last></author>
    <author><first>Rachel</first><last>Beard</last></author>
    <author><first>Rob</first><last>Lauder</last></author>
    <author><first>Davy</first><last>Weissenbacher</last></author>
    <author><first>Matthew</first><last>Scotch</last></author>
    <author><first>Garrick</first><last>Wallstrom</last></author>
    <author><first>Graciela</first><last>Gonzalez</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>1&#8211;9</pages>
    <url>http://www.aclweb.org/anthology/W14-3401</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>tahsin-EtAl:2014:W14-34</bibkey>
  </paper>

  <paper id="3402">
    <title>Temporal Expression Recognition for Cell Cycle Phase Concepts in Biomedical Literature</title>
    <author><first>Negacy</first><last>Hailu</last></author>
    <author><first>Natalya</first><last>Panteleyeva</last></author>
    <author><first>Kevin</first><last>Cohen</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>10&#8211;18</pages>
    <url>http://www.aclweb.org/anthology/W14-3402</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>hailu-panteleyeva-cohen:2014:W14-34</bibkey>
  </paper>

  <paper id="3403">
    <title>Classifying Negative Findings in Biomedical Publications</title>
    <author><first>Bei</first><last>Yu</last></author>
    <author><first>Daniele</first><last>Fanelli</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>19&#8211;23</pages>
    <url>http://www.aclweb.org/anthology/W14-3403</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>yu:2014:W14-34</bibkey>
  </paper>

  <paper id="3404">
    <title>Automated Disease Normalization with Low Rank Approximations</title>
    <author><first>Robert</first><last>Leaman</last></author>
    <author><first>Zhiyong</first><last>Lu</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>24&#8211;28</pages>
    <url>http://www.aclweb.org/anthology/W14-3404</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>leaman-lu:2014:W14-34</bibkey>
  </paper>

  <paper id="3405">
    <title>Decomposing Consumer Health Questions</title>
    <author><first>Kirk</first><last>Roberts</last></author>
    <author><first>Halil</first><last>Kilicoglu</last></author>
    <author><first>Marcelo</first><last>Fiszman</last></author>
    <author><first>Dina</first><last>Demner-Fushman</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>29&#8211;37</pages>
    <url>http://www.aclweb.org/anthology/W14-3405</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>roberts-EtAl:2014:W14-34</bibkey>
  </paper>

  <paper id="3406">
    <title>Detecting Health Related Discussions in Everyday Telephone Conversations for Studying Medical Events in the Lives of Older Adults</title>
    <author><first>Golnar</first><last>Sheikhshab</last></author>
    <author><first>Izhak</first><last>Shafran</last></author>
    <author><first>Jeffrey</first><last>Kaye</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>38&#8211;44</pages>
    <url>http://www.aclweb.org/anthology/W14-3406</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>sheikhshab-shafran-kaye:2014:W14-34</bibkey>
  </paper>

  <paper id="3407">
    <title>Coreference Resolution for Structured Drug Product Labels</title>
    <author><first>Halil</first><last>Kilicoglu</last></author>
    <author><first>Dina</first><last>Demner-Fushman</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>45&#8211;53</pages>
    <url>http://www.aclweb.org/anthology/W14-3407</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>kilicoglu-demnerfushman:2014:W14-34</bibkey>
  </paper>

  <paper id="3408">
    <title>Generating Patient Problem Lists from the ShARe Corpus using SNOMED CT/SNOMED CT CORE Problem List</title>
    <author><first>Danielle</first><last>Mowery</last></author>
    <author><first>Mindy</first><last>Ross</last></author>
    <author><first>Sumithra</first><last>Velupillai</last></author>
    <author><first>Stephane</first><last>Meystre</last></author>
    <author><first>Janyce</first><last>Wiebe</last></author>
    <author><first>Wendy</first><last>Chapman</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>54&#8211;58</pages>
    <url>http://www.aclweb.org/anthology/W14-3408</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>mowery-EtAl:2014:W14-34</bibkey>
  </paper>

  <paper id="3409">
    <title>A System for Predicting ICD-10-PCS Codes from Electronic Health Records</title>
    <author><first>Michael</first><last>Subotin</last></author>
    <author><first>Anthony</first><last>Davis</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>59&#8211;67</pages>
    <url>http://www.aclweb.org/anthology/W14-3409</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>subotin-davis:2014:W14-34</bibkey>
  </paper>

  <paper id="3410">
    <title>Structuring Operative Notes using Active Learning</title>
    <author><first>Kirk</first><last>Roberts</last></author>
    <author><first>Sanda</first><last>Harabagiu</last></author>
    <author><first>Michael</first><last>Skinner</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>68&#8211;76</pages>
    <url>http://www.aclweb.org/anthology/W14-3410</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>roberts-harabagiu-skinner:2014:W14-34</bibkey>
  </paper>

  <paper id="3411">
    <title>Chunking Clinical Text Containing Non-Canonical Language</title>
    <author><first>Aleksandar</first><last>Savkov</last></author>
    <author><first>John</first><last>Carroll</last></author>
    <author><first>Jackie</first><last>Cassell</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>77&#8211;82</pages>
    <url>http://www.aclweb.org/anthology/W14-3411</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>savkov-carroll-cassell:2014:W14-34</bibkey>
  </paper>

  <paper id="3412">
    <title>Decision Style in a Clinical Reasoning Corpus</title>
    <author><first>Limor</first><last>Hochberg</last></author>
    <author><first>Cecilia</first><last>Ovesdotter Alm</last></author>
    <author><first>Esa M.</first><last>Rantanen</last></author>
    <author><first>Caroline M.</first><last>DeLong</last></author>
    <author><first>Anne</first><last>Haake</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>83&#8211;87</pages>
    <url>http://www.aclweb.org/anthology/W14-3412</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>hochberg-EtAl:2014:W14-34</bibkey>
  </paper>

  <paper id="3413">
    <title>Temporal Expressions in Swedish Medical Text &#8211; A Pilot Study</title>
    <author><first>Sumithra</first><last>Velupillai</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>88&#8211;92</pages>
    <url>http://www.aclweb.org/anthology/W14-3413</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>velupillai:2014:W14-34</bibkey>
  </paper>

  <paper id="3414">
    <title>A repository of semantic types in the MIMIC II database clinical notes</title>
    <author><first>Richard</first><last>Osborne</last></author>
    <author><first>Alan</first><last>Aronson</last></author>
    <author><first>Kevin</first><last>Cohen</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>93&#8211;97</pages>
    <url>http://www.aclweb.org/anthology/W14-3414</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>osborne-aronson-cohen:2014:W14-34</bibkey>
  </paper>

  <paper id="3415">
    <title>Extracting drug indications and adverse drug reactions from Spanish health social media</title>
    <author><first>Isabel</first><last>Segura-Bedmar</last></author>
    <author><first>Santiago</first><last>de la Pe&#241;a Gonz&#225;lez</last></author>
    <author><first>Paloma</first><last>Mart&#237;nez</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>98&#8211;106</pages>
    <url>http://www.aclweb.org/anthology/W14-3415</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>segurabedmar-delapenagonzalez-martinez:2014:W14-34</bibkey>
  </paper>

  <paper id="3416">
    <title>Symptom extraction issue</title>
    <author><first>Laure</first><last>Martin</last></author>
    <author><first>Delphine</first><last>Battistelli</last></author>
    <author><first>Thierry</first><last>Charnois</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>107&#8211;111</pages>
    <url>http://www.aclweb.org/anthology/W14-3416</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>martin-battistelli-charnois:2014:W14-34</bibkey>
  </paper>

  <paper id="3417">
    <title>Seeking Informativeness in Literature Based Discovery</title>
    <author><first>Judita</first><last>Preiss</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>112&#8211;117</pages>
    <url>http://www.aclweb.org/anthology/W14-3417</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>preiss:2014:W14-34</bibkey>
  </paper>

  <paper id="3418">
    <title>Towards Gene Recognition from Rare and Ambiguous Abbreviations using a Filtering Approach</title>
    <author><first>Matthias</first><last>Hartung</last></author>
    <author><first>Roman</first><last>Klinger</last></author>
    <author><first>Matthias</first><last>Zwick</last></author>
    <author><first>Philipp</first><last>Cimiano</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>118&#8211;127</pages>
    <url>http://www.aclweb.org/anthology/W14-3418</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>hartung-EtAl:2014:W14-34</bibkey>
  </paper>

  <paper id="3419">
    <title>FFTM: A Fuzzy Feature Transformation Method for Medical Documents</title>
    <author><first>Amir</first><last>Karami</last></author>
    <author><first>Aryya</first><last>Gangopadhyay</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>128&#8211;133</pages>
    <url>http://www.aclweb.org/anthology/W14-3419</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>karami-gangopadhyay:2014:W14-34</bibkey>
  </paper>

  <paper id="3420">
    <title>Using statistical parsing to detect agrammatic aphasia</title>
    <author><first>Kathleen C.</first><last>Fraser</last></author>
    <author><first>Graeme</first><last>Hirst</last></author>
    <author><first>Jed A.</first><last>Meltzer</last></author>
    <author><first>Jennifer E.</first><last>Mack</last></author>
    <author><first>Cynthia K.</first><last>Thompson</last></author>
    <booktitle>Proceedings of BioNLP 2014</booktitle>
    <month>June</month>
    <year>2014</year>
    <address>Baltimore, Maryland</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>134&#8211;142</pages>
    <url>http://www.aclweb.org/anthology/W14-3420</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>fraser-EtAl:2014:W14-34</bibkey>
  </paper>

</volume>

