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<volume id="W16">
  <paper id="3000">
    <title>Proceedings of the 4th BioNLP Shared Task Workshop</title>
    <editor>Claire Nėdellec</editor>
    <editor>Robert Bossy</editor>
    <editor>Jin-Dong Kim</editor>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <url>http://www.aclweb.org/anthology/W16-30</url>
    <bibtype>book</bibtype>
    <bibkey>BioNLP-ST-4:2016</bibkey>
  </paper>

  <paper id="3001">
    <title>Overview of the Regulatory Network of Plant Seed Development (SeeDev) Task at the BioNLP Shared Task 2016.</title>
    <author><first>Estelle</first><last>Chaix</last></author>
    <author><first>Bertrand</first><last>Dubreucq</last></author>
    <author><first>Abdelhak</first><last>Fatihi</last></author>
    <author><first>Dialekti</first><last>Valsamou</last></author>
    <author><first>Robert</first><last>Bossy</last></author>
    <author><first>Mouhamadou</first><last>Ba</last></author>
    <author><first>Louise</first><last>Delėger</last></author>
    <author><first>Pierre</first><last>Zweigenbaum</last></author>
    <author><first>Philippe</first><last>Bessi&#232;res</last></author>
    <author><first>Lo&#239;c</first><last>Lepiniec</last></author>
    <author><first>Claire</first><last>Nėdellec</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>1&#8211;11</pages>
    <url>http://www.aclweb.org/anthology/W16-3001</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>chaix-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3002">
    <title>Overview of the Bacteria Biotope Task at BioNLP Shared Task 2016</title>
    <author><first>Louise</first><last>Delėger</last></author>
    <author><first>Robert</first><last>Bossy</last></author>
    <author><first>Estelle</first><last>Chaix</last></author>
    <author><first>Mouhamadou</first><last>Ba</last></author>
    <author><first>Arnaud</first><last>Ferrė</last></author>
    <author><first>Philippe</first><last>Bessi&#232;res</last></author>
    <author><first>Claire</first><last>Nėdellec</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>12&#8211;22</pages>
    <url>http://www.aclweb.org/anthology/W16-3002</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>deleger-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3003">
    <title>Refactoring the Genia Event Extraction Shared Task Toward a General Framework for IE-Driven KB Development</title>
    <author><first>Jin-Dong</first><last>Kim</last></author>
    <author><first>Yue</first><last>Wang</last></author>
    <author><first>Nicola</first><last>Colic</last></author>
    <author><first>Seung Han</first><last>Beak</last></author>
    <author><first>Yong Hwan</first><last>Kim</last></author>
    <author><first>Min</first><last>Song</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>23&#8211;31</pages>
    <url>http://www.aclweb.org/anthology/W16-3003</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>kim-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3004">
    <title>LitWay, Discriminative Extraction for Different Bio-Events</title>
    <author><first>Chen</first><last>Li</last></author>
    <author><first>Zhiqiang</first><last>Rao</last></author>
    <author><first>Xiangrong</first><last>Zhang</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>32&#8211;41</pages>
    <url>http://www.aclweb.org/anthology/W16-3004</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>li-rao-zhang:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3005">
    <title>VERSE: Event and Relation Extraction in the BioNLP 2016 Shared Task</title>
    <author><first>Jake</first><last>Lever</last></author>
    <author><first>Steven JM</first><last>Jones</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>42&#8211;49</pages>
    <url>http://www.aclweb.org/anthology/W16-3005</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>lever-jones:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3006">
    <title>A dictionary- and rule-based system for identification of bacteria and habitats in text</title>
    <author><first>Helen V</first><last>Cook</last></author>
    <author><first>Evangelos</first><last>Pafilis</last></author>
    <author><first>Lars Juhl</first><last>Jensen</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>50&#8211;55</pages>
    <url>http://www.aclweb.org/anthology/W16-3006</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>cook-pafilis-jensen:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3007">
    <title>Ontology-Based Categorization of Bacteria and Habitat Entities using Information Retrieval Techniques</title>
    <author><first>Mert</first><last>Tiftikci</last></author>
    <author><first>Hakan</first><last>&#x15E;ahin</last></author>
    <author><first>Berfu</first><last>B&#252;y&#252;k&#246;z</last></author>
    <author><first>Alper</first><last>Yayık&#231;ı</last></author>
    <author><first>Arzucan</first><last>&#214;zg&#252;r</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>56&#8211;63</pages>
    <url>http://www.aclweb.org/anthology/W16-3007</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>tiftikci-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3008">
    <title>Identification of Mentions and Relations between Bacteria and Biotope from PubMed Abstracts</title>
    <author><first>Cyril</first><last>Grouin</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>64&#8211;72</pages>
    <url>http://www.aclweb.org/anthology/W16-3008</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>grouin:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3009">
    <title>Deep Learning with Minimal Training Data: TurkuNLP Entry in the BioNLP Shared Task 2016</title>
    <author><first>Farrokh</first><last>Mehryary</last></author>
    <author><first>Jari</first><last>Bj&#246;rne</last></author>
    <author><first>Sampo</first><last>Pyysalo</last></author>
    <author><first>Tapio</first><last>Salakoski</last></author>
    <author><first>Filip</first><last>Ginter</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>73&#8211;81</pages>
    <url>http://www.aclweb.org/anthology/W16-3009</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>mehryary-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3010">
    <title>SeeDev Binary Event Extraction using SVMs and a Rich Feature Set</title>
    <author><first>Nagesh</first><last>C. Panyam</last></author>
    <author><first>Gitansh</first><last>Khirbat</last></author>
    <author><first>Karin</first><last>Verspoor</last></author>
    <author><first>Trevor</first><last>Cohn</last></author>
    <author><first>Kotagiri</first><last>Ramamohanarao</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>82&#8211;87</pages>
    <url>http://www.aclweb.org/anthology/W16-3010</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>cpanyam-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3011">
    <title>Extraction of Regulatory Events using Kernel-based Classifiers and Distant Supervision</title>
    <author><first>Andre</first><last>Lamurias</last></author>
    <author><first>Miguel J.</first><last>Rodrigues</last></author>
    <author><first>Luka A.</first><last>Clarke</last></author>
    <author><first>Francisco M.</first><last>Couto</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>88&#8211;92</pages>
    <url>http://www.aclweb.org/anthology/W16-3011</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>lamurias-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3012">
    <title>DUTIR in BioNLP-ST 2016: Utilizing Convolutional Network and Distributed Representation to Extract Complicate Relations</title>
    <author><first>Honglei</first><last>Li</last></author>
    <author><first>Jianhai</first><last>Zhang</last></author>
    <author><first>Jian</first><last>Wang</last></author>
    <author><first>Hongfei</first><last>Lin</last></author>
    <author><first>Zhihao</first><last>Yang</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>93&#8211;100</pages>
    <url>http://www.aclweb.org/anthology/W16-3012</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>li-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

  <paper id="3013">
    <title>Extracting Biomedical Event Using Feature Selection and Word Representation</title>
    <author><first>Xinyu</first><last>He</last></author>
    <author><first>Lishuang</first><last>Li</last></author>
    <author><first>Jieqiong</first><last>Zheng</last></author>
    <author><first>Meiyue</first><last>Qin</last></author>
    <booktitle>Proceedings of the 4th BioNLP Shared Task Workshop</booktitle>
    <month>August</month>
    <year>2016</year>
    <address>Berlin, Germany</address>
    <publisher>Association for Computational Linguistics</publisher>
    <pages>101</pages>
    <url>http://www.aclweb.org/anthology/W16-3013</url>
    <bibtype>inproceedings</bibtype>
    <bibkey>he-EtAl:2016:BioNLP-ST-4</bibkey>
  </paper>

</volume>

