pdf (full)
bib (full) Proceedings of BioNLP 15

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Proceedings of BioNLP 15
Kevin Bretonnel Cohen | Dina Demner-Fushman | Sophia Ananiadou | Jun-ichi Tsujii

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Complex Event Extraction using DRUM
James Allen | Will de Beaumont | Lucian Galescu | Choh Man Teng

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Making the most of limited training data using distant supervision
Roland Roller | Mark Stevenson

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An extended dependency graph for relation extraction in biomedical texts
Yifan Peng | Samir Gupta | Cathy Wu | Vijay Shanker

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Event Extraction in pieces:Tackling the partial event identification problem on unseen corpora
Chrysoula Zerva | Sophia Ananiadou

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Extracting Biological Pathway Models From NLP Event Representations
Michael Spranger | Sucheendra Palaniappan | Samik Ghosh

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Shallow Training is cheap but is it good enough? Experiments with Medical Fact Coding
Ramesh Nallapati | Radu Florian

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Stacked Generalization for Medical Concept Extraction from Clinical Notes
Youngjun Kim | Ellen Riloff

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Extracting Disease-Symptom Relationships by Learning Syntactic Patterns from Dependency Graphs
Mohsen Hassan | Olfa Makkaoui | Adrien Coulet | Yannick Toussaint

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Extracting Time Expressions from Clinical Text
Timothy Miller | Steven Bethard | Dmitriy Dligach | Chen Lin | Guergana Savova

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Exploiting Task-Oriented Resources to Learn Word Embeddings for Clinical Abbreviation Expansion
Yue Liu | Tao Ge | Kusum Mathews | Heng Ji | Deborah McGuinness

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Semantic Type Classification of Common Words in Biomedical Noun Phrases
Amy Siu | Gerhard Weikum

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CoMAGD: Annotation of Gene-Depression Relations
Rize Jin | Jinseon You | Jin-Woo Chung | Hee-Jin Lee | Maria Wolters | Jong Park

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Lexical Characteristics Analysis of Chinese Clinical Documents
Meizhi Ju | Haomin Li | Huilong Duan

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Using word embedding for bio-event extraction
Chen Li | Runqing Song | Maria Liakata | Andreas Vlachos | Stephanie Seneff | Xiangrong Zhang

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Measuring the readability of medical research journal abstracts
Samuel J. Severance | K. Bretonnel Cohen

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Translating Electronic Health Record Notes from English to Spanish: A Preliminary Study
Weisong Liu | Shu Cai

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Automatic Detection of Answers to Research Questions from Medline Abstracts
Abdulaziz Alamri | Mark Stevenson

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A preliminary study on automatic identification of patient smoking status in unstructured electronic health records
Jitendra Jonnagaddala | Hong-Jie Dai | Pradeep Ray | Siaw-Teng Liaw

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Restoring the intended structure of Hungarian ophthalmology documents
Borbála Siklósi | Attila Novák

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Evaluating distributed word representations for capturing semantics of biomedical concepts
Muneeb TH | Sunil Sahu | Ashish Anand

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Investigating Public Health Surveillance using Twitter
Antonio Jimeno Yepes | Andrew MacKinlay | Bo Han

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Clinical Abbreviation Disambiguation Using Neural Word Embeddings
Yonghui Wu | Jun Xu | Yaoyun Zhang | Hua Xu

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Representing Clinical Diagnostic Criteria in Quality Data Model Using Natural Language Processing
Na Hong | Dingcheng Li | Yue Yu | Hongfang Liu | Christopher G. Chute | Guoqian Jiang