David W Eyre

Author directory

Also published as: David W. Eyre


2026

In clinical tabular prediction, classical machine learning models with feature engineering often outperform neural methods. LLMs are increasingly used to automate this process, acting as domain experts that propose diverse feature transformations to boost downstream performance. However, the feature generation process of existing LLM-based methods is agnostic to the downstream learner: the LLM receives no signal about which features currently drive predictions or where the model’s representational capacity falls short, so proposals are neither targeted to promising regions of the feature space nor tailored to the learner’s inductive bias. This shortcoming is amplified in healthcare data, which simultaneously exhibits class imbalance, heterogeneous feature spaces, and strict interpretability requirements. In this paper, we propose MedFeat, the first feature engineering framework inspired by the workflow of machine learning practitioners, leveraging model-awareness and feature importance signals to iteratively guide feature discovery for clinical tabular learning. We evaluate MedFeat on a broad range of challenging real-world clinical tasks and show that it statistically significantly outperforms state-of-the-art baselines, with an average F1 improvement of more than 10% over the baseline across models with distinct inductive biases.
Free-text evaluation of multimodal clinical question answering (QA) systems remains a central challenge in medical NLP due to the complexity of medical knowledge, the necessity of integrating visual and textual information, and the limitations of existing automatic evaluation metrics for open-ended outputs. In this work, we present a training-free, agentic evaluation framework that formulates response scoring as evidence-guided orchestration of components rather than a task requiring conventional end-to-end fine-tuning of underlying LLMs/VLMs. Our ReAct-style evaluator combines (i) structured reasoning, (ii) multimodal retrieval of similar encounters, (iii) auxiliary explainable feature-based regression models that provide numeric priors and human-interpretable signals, (iv) VLM-generated visual QA references for comparison, and (v) optional image augmentation tools. Unlike standard LLM-as-a-judge approaches that rely on direct generative scoring, our agent decomposes evaluation into modular stages of evidence acquisition, structured feature modeling, and integrative reasoning. We apply this architecture to the MEDIQA-EVAL shared task - a multimodal, multilingual clinical evaluation challenge that assesses system-generated answers for patient queries paired with images along multiple clinical quality dimensions. We report results across both English and Chinese tracks, comparing against baseline prompting methods, and discuss the feasibility and limitations of lightweight agentic systems for clinical QA evaluation.

2025

Large language models (LLMs) can produce fluent but factually incorrect outputs and often have limited ability to attribute their claims to source material. This undermines their reliability, particularly in multi-hop and high-stakes domains such as medicine. We propose Tree-of-Quote (ToQ) prompting, a structured framework that decomposes complex questions into subquestions, generates quotes to support each step without retrieval, and selectively advances reasoning based on quote quality. We also introduce FQ-Score, a unified metric that captures answer correctness, attribution fidelity, and reasoning quality. Experiments on StrategyQA, 2WikiMultiHopQA, MuSiQue, MoreHopQA, and MedQA demonstrate that ToQ improves factuality and attribution over standard prompting baselines. To validate FQ-Score as a proxy for human judgment, we conduct two reader studies with clinicians on medical questions, and observe strong correlations. Both clinician scores and FQ-Scores also indicate a preference for ToQ over baselines due to a combination of greater correctness, completeness, and logical flow. Our results suggest ToQ is a promising approach for building more trustworthy and auditable LLM systems.
We introduce RadEval, a unified, open-source framework for evaluating radiology texts. RadEval consolidates a diverse range of metrics - from classic n‐gram overlap (BLEU, ROUGE) and contextual measures (BERTScore) to clinical concept-based scores (F1CheXbert, F1RadGraph, RaTEScore, SRR-BERT, TemporalEntityF1) and advanced LLM‐based evaluators (GREEN). We refine and standardize implementations, extend GREEN to support multiple imaging modalities with a more lightweight model, and pretrain a domain-specific radiology encoder - demonstrating strong zero-shot retrieval performance. We also release a richly annotated expert dataset with over 450 clinically significant error labels and show how different metrics correlate with radiologist judgment. Finally, RadEval provides statistical testing tools and baseline model evaluations across multiple publicly available datasets, facilitating reproducibility and robust benchmarking in radiology report generation.