Time series data are integral to applications across domains such as finance, healthcare, transportation, and environmental science.While recent work has begun to explore time series question answering (QA), existing benchmarks still provide limited coverage of analytical capabilities under a standardized evaluation framework. We introduce TSAQA, a novel unified benchmark designed to broaden task coverage and evaluate diverse temporal analysis capabilities. TSAQA integrates 6 diverse tasks under a single framework ranging fromconventional analysis, including anomaly detection and classification, to advanced analysis, such as characterization, comparison, datatransformation, and temporal relationship analysis. Spanning 210k samples across 13 domains, the dataset employs diverse formats, including true-or-false (TF), multiple-choice (MC), and a novel puzzling (PZ), to comprehensively assess time series analysis. Zero-shotevaluation shows that TSAQA remains challenging for current Large Language Models (LLMs): best-performing commercial model,Gemini-2.5-Flash, achieves 65.08 average accuracy. Although instruction tuning improves open-source models’ performance: the best-performing model, LLaMA-3.1-8B, shows significant room for improvement. We further evaluate language-capable time series foundation models (TSFMs), showing that TSAQA extends beyond general-purpose LLMs. The data are available in https://huggingface.co/datasets/TSAQA/TSAQA-Benchmark.

Language Models (LMs) are increasingly challenging the dominance of domain-specific models, such as Graph Neural Networks (GNNs) and Graph Transformers (GTs), in graph learning tasks. Following this trend, we propose a novel approach that empowers off-the-shelf LMs to achieve performance comparable to state-of-the-art (SOTA) GNNs on node classification tasks, without requiring any architectural modifications. By preserving the LM’s original architecture, our approach retains a key benefit of LM instruction tuning: the ability to jointly train on diverse datasets, fostering greater flexibility and efficiency. To achieve this, we introduce two key augmentation strategies: (1) Enriching LMs’ input using topological and semantic retrieval methods, which provide richer contextual information, and (2) guiding the LMs’ classification process through a lightweight GNN classifier that effectively prunes class candidates. Our experiments on real-world datasets show that backbone Flan-T5 LMs equipped with these augmentation strategies outperform SOTA text-output node classifiers and are comparable to top-performing vector-output node classifiers. By bridging the gap between specialized node classifiers and general LMs, this work paves the way for more versatile and widely applicable graph learning models. We will open-source the code upon publication.

Retrieval-Augmented Generation (RAG) enhances Large Language Models (LLMs) by integrating them with an external knowledge base to improve the answer relevance and accuracy. In real-world scenarios, beyond pure text, a substantial amount of knowledge is stored in tables, and user questions often require retrieving answers that are distributed across multiple tables. Retrieving knowledge from a table corpora (i.e., various individual tables) for a question remains nascent, for (i) how to understand intra- and inter-table knowledge effectively, (ii) how to filter unnecessary tables and retrieve the most relevant tables efficiently, (iii) how to organize complex retrieved contexts for LLMs’ reasoning, and (iv) how to evaluate the corresponding performance in a realistic setting. Facing the above challenges, in this paper, we first propose a table-corpora-aware RAG framework, named T-RAG, which consists of the hierarchical memory index, multi-stage retrieval, and graph-aware context organization for effective and efficient table knowledge retrieval and inference. Then, we develop a multi-table question answering benchmark named MultiTableQA, which spans 3 different task types, 57,193 tables, and 23,758 questions in total, and the sources are all from real-world scenarios. Based on MultiTableQA, we perform a comprehensive comparison of table retrieval methods, RAG-based approaches, and table-to-graph representation learning methods. T-RAG consistently achieves state-of-the-art accuracy, recall, and runtime performance, with improvements of up to 9.4%. Moreover, T-RAG yields an average inference gain of 11.8% across different downstream backbone LLMs. Our code and data are available at https://github.com/jiaruzouu/T-RAG.

Reasoning structures (e.g., chains and graphs) are increasingly used for probabilistic inference, factuality verification, and uncertainty estimation, but their structural reliability is rarely evaluated directly. We test whether this reliability holds through a proposed two-stage diagnostic evaluation in open-ended multi-hop QA. Stage 1 tests different capabilities required to construct reasoning graphs, showing that graph reliability varies with topology, prompt design, and model family. Stage 2 uses uncertainty estimation as a downstream test case. Generated-edge experiments show that graph-based computation is sensitive to upstream graph errors, with performance dropping relative to the gold-graph setting. Gold-graph experiments further show that graph structure provides little benefit when used only as prompt context, but improves the separation of correct from incorrect answers by confidence score and enables node-level diagnostics.

Diffusion language models (DLMs) have emerged as a promising alternative to the auto-regressive paradigm. With bidirectional attention and any-order generation, DLMs naturally fit infilling tasks, which require generating a middle span conditioned on both the prefix and the suffix. However, infilling is sensitive to the length of the span, while DLMs require the length to be fixed before generation. Although prior studies extend DLMs to dynamic lengths, they still suffer from two limitations. (i) *Sensitivity to initial length.* These methods require a preset length to initialize the search and are highly sensitive to this initial length, often yielding suboptimal results. (ii) *Inference inefficiency.* They either insert length-changing operations during generation or repeatedly search for an appropriate length using multi-step denoising confidence, both of which introduce substantial additional forward passes and computational cost. Therefore, we propose PILL (**P**robing-based **I**nfi**L**ing with preset-**L**ength-free decoding), an efficient infilling method for DLMs that requires no preset initial length and drastically reduces the number of forward passes compared to baselines. Experiments show that, across five DLMs spanning different families, architectures, and training recipes on eight infilling benchmarks, PILL improves over the strongest baseline by +4.8 average pass rate on code and +6.0 BLEU-2 on text, while running 1.82× faster than that baseline.

Material claims in papers, patents, etc., often involve physical feasibility (e.g., stability under conditions, property consistency), not just textual feasibility. Yet most claim verifiers operate over language, therefore producing ungrounded judgments. On the other hand, directfirst-principles verification (e.g., density functional theory, DFT) is inflexible and hard to invoke from underspecified free-form claims.Therefore, we introduce PhyVer, a physics-grounded material claim verification system that bridges this gap by translating claimsinto multi-fidelity physical evidence and interpretable verdicts. To support human-in-the-loop inspection, we present an interactive web interface that visualizes the instantiated structure, optimization trajectories, DFT summaries, and the final decision. On expert-labeled claims, PhyVer improves agreement with experts over text-only GPT-5.1, reducing MAE from 1.54 to 1.20 and Signed MAE from0.95 to 0.82, and increasing Accuracy@±1 from 50% to 70%.

While great success has been achieved in building vision models with Contrastive Language-Image Pre-training (CLIP) over Internet-scale image-text pairs, building transferable Graph Neural Networks (GNNs) with CLIP pipeline is challenging because of the scarcity of labeled data and text supervision, different levels of downstream tasks, and the conceptual gaps between domains. In this work, to address these issues, we propose a multi-modal prompt learning paradigm to effectively adapt pre-trained GNN to downstream tasks and data, given only a few semantically labeled samples, each with extremely weak text supervision. Our new paradigm embeds the graphs directly in the same space as the Large Language Models (LLMs) by learning both graph prompts and text prompts simultaneously. We demonstrate the superior performance of our paradigm in few-shot, multi-task-level, and cross-domain settings. Moreover, we build the first CLIP-style zero-shot classification prototype that can generalize GNNs to unseen classes with extremely weak text supervision.