Gianluca Moro


2022

pdf bib
Discriminative Marginalized Probabilistic Neural Method for Multi-Document Summarization of Medical Literature
Gianluca Moro | Luca Ragazzi | Lorenzo Valgimigli | Davide Freddi
Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)

Although current state-of-the-art Transformer-based solutions succeeded in a wide range for single-document NLP tasks, they still struggle to address multi-input tasks such as multi-document summarization. Many solutions truncate the inputs, thus ignoring potential summary-relevant contents, which is unacceptable in the medical domain where each information can be vital. Others leverage linear model approximations to apply multi-input concatenation, worsening the results because all information is considered, even if it is conflicting or noisy with respect to a shared background. Despite the importance and social impact of medicine, there are no ad-hoc solutions for multi-document summarization. For this reason, we propose a novel discriminative marginalized probabilistic method (DAMEN) trained to discriminate critical information from a cluster of topic-related medical documents and generate a multi-document summary via token probability marginalization. Results prove we outperform the previous state-of-the-art on a biomedical dataset for multi-document summarization of systematic literature reviews. Moreover, we perform extensive ablation studies to motivate the design choices and prove the importance of each module of our method.

pdf bib
Text-to-Text Extraction and Verbalization of Biomedical Event Graphs
Giacomo Frisoni | Gianluca Moro | Lorenzo Balzani
Proceedings of the 29th International Conference on Computational Linguistics

Biomedical events represent complex, graphical, and semantically rich interactions expressed in the scientific literature. Almost all contributions in the event realm orbit around semantic parsing, usually employing discriminative architectures and cumbersome multi-step pipelines limited to a small number of target interaction types. We present the first lightweight framework to solve both event extraction and event verbalization with a unified text-to-text approach, allowing us to fuse all the resources so far designed for different tasks. To this end, we present a new event graph linearization technique and release highly comprehensive event-text paired datasets, covering more than 150 event types from multiple biology subareas (English language). By streamlining parsing and generation to translations, we propose baseline transformer model results according to multiple biomedical text mining benchmarks and NLG metrics. Our extractive models achieve greater state-of-the-art performance than single-task competitors and show promising capabilities for the controlled generation of coherent natural language utterances from structured data.

pdf bib
NLG-Metricverse: An End-to-End Library for Evaluating Natural Language Generation
Giacomo Frisoni | Antonella Carbonaro | Gianluca Moro | Andrea Zammarchi | Marco Avagnano
Proceedings of the 29th International Conference on Computational Linguistics

Driven by deep learning breakthroughs, natural language generation (NLG) models have been at the center of steady progress in the last few years, with a ubiquitous task influence. However, since our ability to generate human-indistinguishable artificial text lags behind our capacity to assess it, it is paramount to develop and apply even better automatic evaluation metrics. To facilitate researchers to judge the effectiveness of their models broadly, we introduce NLG-Metricverse—an end-to-end open-source library for NLG evaluation based on Python. Our framework provides a living collection of NLG metrics in a unified and easy-to-use environment, supplying tools to efficiently apply, analyze, compare, and visualize them. This includes (i) the extensive support to heterogeneous automatic metrics with n-arity management, (ii) the meta-evaluation upon individual performance, metric-metric and metric-human correlations, (iii) graphical interpretations for helping humans better gain score intuitions, (iv) formal categorization and convenient documentation to accelerate metrics understanding. NLG-Metricverse aims to increase the comparability and replicability of NLG research, hopefully stimulating new contributions in the area.

pdf bib
BioReader: a Retrieval-Enhanced Text-to-Text Transformer for Biomedical Literature
Giacomo Frisoni | Miki Mizutani | Gianluca Moro | Lorenzo Valgimigli
Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing

The latest batch of research has equipped language models with the ability to attend over relevant and factual information from non-parametric external sources, drawing a complementary path to architectural scaling. Besides mastering language, exploiting and contextualizing the latent world knowledge is crucial in complex domains like biomedicine. However, most works in the field rely on general-purpose models supported by databases like Wikipedia and Books. We introduce BioReader, the first retrieval-enhanced text-to-text model for biomedical natural language processing. Our domain-specific T5-based solution augments the input prompt by fetching and assembling relevant scientific literature chunks from a neural database with ≈60 million tokens centered on PubMed. We fine-tune and evaluate BioReader on a broad array of downstream tasks, significantly outperforming several state-of-the-art methods despite using up to 3x fewer parameters. In tandem with extensive ablation studies, we show that domain knowledge can be easily altered or supplemented to make the model generate correct predictions bypassing the retraining step and thus addressing the literature overload issue.