Huinan Xu
Author directory2026
Beyond Conditional Computation: Retrieval-Augmented Genomic Foundation Models with Gengram
Huinan Xu | Xuyang Feng | Junhong Chen | Junchen Liu | Kaiwen Deng | Kai Ding | Shengning Long | Jiaxue Shuai | Zhaorong li | Shiping Liu | Guirong Xue | Zhan Xiao
Proceedings of the 2026 Conference on Empirical Methods in Natural Language Processing
Huinan Xu | Xuyang Feng | Junhong Chen | Junchen Liu | Kaiwen Deng | Kai Ding | Shengning Long | Jiaxue Shuai | Zhaorong li | Shiping Liu | Guirong Xue | Zhan Xiao
Proceedings of the 2026 Conference on Empirical Methods in Natural Language Processing
Current genomic foundation models (GFMs) rely largely on extensive neural computation to implicitly infer conserved biological motifs from single-nucleotide inputs. We introduce Gengram, a conditional memory module that provides an explicit and efficient lookup primitive for multi-base motifs through a genome-specific hashing scheme. Integrated into state-of-the-art (SOTA) GFM backbones, Gengram achieves substantial improvements of up to 22.6% across functional genomics tasks and generalizes across diverse architectures. Further analysis of Gengram’s latent space reveals biologically meaningful representations aligned with established genomic principles. By introducing structured motif memory as a modeling primitive, Gengram improves empirical performance and mechanistic interpretability, offering a scalable and biology-aligned direction for next-generation GFMs. The code is available at https://github.com/zhejianglab/Gengram, and the model weights are available at https://huggingface.co/ZhejiangLab/Gengram.
2024
TeleChat: An Open-source Billingual Large Language Model
Zihan Wang | XinZhang Liu | Shixuan Liu | Yitong Yao | Yunyao Huang | Mengxiang Li | Zhongjiang He | Yongxian Li | Luwen Pu | Huinan Xu | Chao Wang | Shuangyong Song
Proceedings of the 10th SIGHAN Workshop on Chinese Language Processing (SIGHAN-10)
Zihan Wang | XinZhang Liu | Shixuan Liu | Yitong Yao | Yunyao Huang | Mengxiang Li | Zhongjiang He | Yongxian Li | Luwen Pu | Huinan Xu | Chao Wang | Shuangyong Song
Proceedings of the 10th SIGHAN Workshop on Chinese Language Processing (SIGHAN-10)
In this paper, we present TeleChat, a collection of large language models (LLMs) with parameters of 7 billion and 12 billion. TeleChat is initially pretrained on an extensive corpus containing a diverse collection of texts from both English and Chinese languages, encompassing trillions of tokens. Subsequently, the model undergoes fine-tuning to align with human preferences, following a detailed methodology that we describe. We evaluate the performance of TeleChat on various tasks, including general dialogue generation, language understanding, mathematics, reasoning, code generation, and knowledge-based question answering. Our findings indicate that TeleChat achieves state-of-the-art performance to other open-source models of similar size across a wide range of public benchmarks. To support future research and applications utilizing LLMs, we release the fine-tuned model checkpoints of TeleChat-7B and TeleChat-12B, along with code and a portion of our filtered high-quality pretraining data, to the public community.