Patient adherence is a critical factor in health outcomes. We present a framework to extract adherence information from electronic health records, including both sentence-level information indicating general adherence information (full, partial, none, etc.) and span-level information providing additional information such as adherence type (medication or nonmedication), reasons and outcomes. We annotate and make publicly available a new corpus of 3,000 de-identified sentences, and discuss the language physicians use to document adherence information. We also explore models based on state-of-the-art transformers to automate both tasks.

The focus of a negation is the set of tokens intended to be negated, and a key component for revealing affirmative alternatives to negated utterances. In this paper, we experiment with neural networks to predict the focus of negation. Our main novelty is leveraging a scope detector to introduce the scope of negation as an additional input to the network. Experimental results show that doing so obtains the best results to date. Additionally, we perform a detailed error analysis providing insights into the main error categories, and analyze errors depending on whether the model takes into account scope and context information.