Automated interpretability systems aim to reduce the need for human labor and scale analysis to increasingly large models and diverse tasks. Recent efforts toward this goal leverage large language models (LLMs) at increasing levels of autonomy, ranging from fixed one-shot workflows to fully autonomous interpretability agents. This shift creates a corresponding need to scale evaluation approaches to keep pace with both the volume and complexity of generated explanations. We investigate this challenge in the context of automated circuit analysis—explaining the roles of model components when performing specific tasks. To this end, we build an agentic system in which a research agent iteratively designs experiments and refines hypotheses. When evaluated against human expert explanations across six circuit analysis tasks in the literature, the system appears competitive. However, closer examination reveals several pitfalls of replication-based evaluation: human expert explanations can be subjective or incomplete, outcome-based comparisons obscure the research process, and LLM-based systems may reproduce published findings via memorization or informed guessing. To address some of these pitfalls, we propose an unsupervised intrinsic evaluation based on the functional interchangeability of model components. Our work demonstrates fundamental challenges in evaluating complex automated interpretability systems and reveals key limitations of replication-based evaluation.

A widely used strategy to discover and understand language model mechanisms is circuit analysis. A circuit is a minimal subgraph of a model’s computation graph that executes a specific task. We identify a gap in existing circuit discovery methods: they assume circuits are position-invariant, treating model components as equally relevant across input positions. This limits their ability to capture cross-positional interactions or mechanisms that vary across positions. To address this gap, we propose two improvements to incorporate positionality into circuits, even on tasks containing variable-length examples. First, we extend edge attribution patching, a gradient-based method for circuit discovery, to differentiate between token positions. Second, we introduce the concept of a dataset schema, which defines token spans with similar semantics across examples, enabling position-aware circuit discovery in datasets with variable length examples. We additionally develop an automated pipeline for schema generation and application using large language models. Our approach enables fully automated discovery of position-sensitive circuits, yielding better trade-offs between circuit size and faithfulness compared to prior work.