Vassilis N. Ioannidis


2025

pdf bib
HybGRAG: Hybrid Retrieval-Augmented Generation on Textual and Relational Knowledge Bases
Meng-Chieh Lee | Qi Zhu | Costas Mavromatis | Zhen Han | Soji Adeshina | Vassilis N. Ioannidis | Huzefa Rangwala | Christos Faloutsos
Proceedings of the 63rd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)

Given a semi-structured knowledge base (SKB), where text documents are interconnected by relations, how can we effectively retrieve relevant information to answer user questions?Retrieval-Augmented Generation (RAG) retrieves documents to assist large language models (LLMs) in question answering; while Graph RAG (GRAG) uses structured knowledge bases as its knowledge source.However, many questions require both textual and relational information from SKB — referred to as “hybrid” questions — which complicates the retrieval process and underscores the need for a hybrid retrieval method that leverages both information.In this paper, through our empirical analysis, we identify key insights that show why existing methods may struggle with hybrid question answering (HQA) over SKB. Based on these insights, we propose HybGRAG for HQA, consisting of a retriever bank and a critic module, with the following advantages:1. Agentic, it automatically refines the output by incorporating feedback from the critic module, 2. Adaptive, it solves hybrid questions requiring both textual and relational information with the retriever bank,3. Interpretable, it justifies decision making with intuitive refinement path, and4. Effective, it surpasses all baselines on HQA benchmarks.In experiments on the STaRK benchmark, HybGRAG achieves significant performance gains, with an average relative improvement in Hit@1 of 51%.

pdf bib
BYOKG-RAG: Multi-Strategy Graph Retrieval for Knowledge Graph Question Answering
Costas Mavromatis | Soji Adeshina | Vassilis N. Ioannidis | Zhen Han | Qi Zhu | Ian Robinson | Bryan Thompson | Huzefa Rangwala | George Karypis
Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing

Knowledge graph question answering (KGQA) presents significant challenges due to the structural and semantic variations across input graphs. Existing works rely on Large Language Model (LLM) agents for graph traversal and retrieval; an approach that is sensitive to traversal initialization, as it is prone to entity linking errors and may not generalize well to custom (“bring-your-own”) KGs. We introduce BYOKG-RAG, a framework that enhances KGQA by synergistically combining LLMs with specialized graph retrieval tools. In BYOKG-RAG, LLMs generate critical graph artifacts (question entities, candidate answers, reasoning paths, and OpenCypher queries), and graph tools link these artifacts to the KG and retrieve relevant graph context. The retrieved context enables the LLM to iteratively refine its graph linking and retrieval, before final answer generation. By retrieving context from different graph tools, BYOKG-RAG offers a more general and robust solution for QA over custom KGs. Through experiments on five benchmarks spanning diverse KG types, we demonstrate that BYOKG-RAG outperforms the second-best graph retrieval method by 4.5% points while showing better generalization to custom KGs. BYOKG-RAG framework is open-sourced at https://github.com/awslabs/graphrag-toolkit.

pdf bib
GRIL: Knowledge Graph Retrieval-Integrated Learning with Large Language Models
Jialin Chen | Houyu Zhang | Seongjun Yun | Alejandro Mottini | Rex Ying | Xiang Song | Vassilis N. Ioannidis | Zheng Li | Qingjun Cui
Findings of the Association for Computational Linguistics: EMNLP 2025

Retrieval-Augmented Generation (RAG) has significantly mitigated the hallucinations of Large Language Models (LLMs) by grounding the generation with external knowledge. Recent extensions of RAG to graph-based retrieval offer a promising direction, leveraging the structural knowledge for multi-hop reasoning. However, existing graph RAG typically decouples retrieval and reasoning processes, which prevents the retriever from adapting to the reasoning needs of the LLM. They also struggle with scalability when performing multi-hop expansion over large-scale graphs, or depend heavily on annotated ground-truth entities, which are often unavailable in open-domain settings. To address these challenges, we propose a novel graph retriever trained end-to-end with LLM, which features an attention-based growing and pruning mechanism, adaptively navigating multi-hop relevant entities while filtering out noise. Within the extracted subgraph, structural knowledge and semantic features are encoded via soft tokens and the verbalized graph, respectively, which are infused into the LLM together, thereby enhancing its reasoning capability and facilitating interactive joint training of the graph retriever and the LLM reasoner. Experimental results across three QA benchmarks show that our approach consistently achieves state-of-the-art performance, validating the strength of joint graph–LLM optimization for complex reasoning tasks. Notably, our framework eliminates the need for predefined ground-truth entities by directly optimizing the retriever using LLM logits as implicit feedback, making it especially effective in open-domain settings.