Wenlan Wei


2021

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Towards Visual Question Answering on Pathology Images
Xuehai He | Zhuo Cai | Wenlan Wei | Yichen Zhang | Luntian Mou | Eric Xing | Pengtao Xie
Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing (Volume 2: Short Papers)

Pathology imaging is broadly used for identifying the causes and effects of diseases or injuries. Given a pathology image, being able to answer questions about the clinical findings contained in the image is very important for medical decision making. In this paper, we aim to develop a pathological visual question answering framework to analyze pathology images and answer medical questions related to these images. To build such a framework, we create PathVQA, a VQA dataset with 32,795 questions asked from 4,998 pathology images. We also propose a three-level optimization framework which performs self-supervised pretraining and VQA finetuning end-to-end to learn powerful visual and textual representations jointly and automatically identifies and excludes noisy self-supervised examples from pretraining. We perform experiments on our created PathVQA dataset and the results demonstrate the effectiveness of our proposed methods. The datasets and code are available at https://github.com/UCSD-AI4H/PathVQA