UIUC, Texas A&M

Other people with similar names: Yu Zhang (Southeast University), Yu Zhang (Harbin), Yu Zhang (Zhejiang), Yu Zhang (Oxford), Yu Zhang, Yu Zhang (SJTU), Yu Zhang, YU Zhang, Yu Zhang, Yu Zhang, Yu Zhang, Yu Zhang, Yu Zhang, Yu Zhang (Harbin), Yu Zhang, Yu Zhang, Yu Zhang, Yu Zhang

Unverified author pages with similar names: Yu Zhang


2026

Long-horizon conversational agents need persistent memory beyond a fixed context window, yet memory effectiveness depends on the units stored and retrieved. Existing systems either discard fine-grained details during compression, retrieve units that are too coarse or context-poor, or fragment discourse into entity-relation triples. We propose Neo-Davidsonian Discourse Units: enriched Elementary Discourse Units (EDUs) that each express one event or fact with normalized entities, temporal grounding, and enough context to stand alone. The resulting units are non-lossy at the session level, atomic for retrieval, and naturally expose event arguments for graph-based associative recall. We instantiate this representation in EMem, which retrieves EDUs with dense representations and relevance filtering based on large language models, and EMem-G, which further organizes sessions, EDUs, and arguments in an event graph and applies Personalized PageRank. On LoCoMo and LongMemEvalS benchmarks, our methods improve over prior state-of-the-art by up to 21.3% while using up to 7× shorter effective context.
The rapid growth of scientific literature calls for automated methods to assess and predict research impact.Prior work has largely focused on citation-based metrics, leaving limited evaluation of models’ capability to reason about other impact dimensions.To this end, we introduce SciImpact, a large-scale, multi-dimensional benchmark for scientific impact prediction spanning 19 fields.SciImpact captures various forms of scientific influence, ranging from citation counts to award recognition, media attention, patent reference, and artifact adoption, by integrating heterogeneous data sources and targeted web crawling.It comprises 215,928 contrastive paper pairs reflecting meaningful impact differences in both short- (e.g., Best Paper Award) and long-term settings (e.g., Nobel Prize).We evaluate 11 widely used large language models (LLMs) on SciImpact.Results show that off-the-shelf models show substantial variability across dimensions and fields, while multi-task supervised fine-tuning consistently enables smaller LLMs (e.g., 4B) to markedly outperform much larger models (e.g., 30B) and surpass powerful closed-source LLMs (e.g., o4-mini).These results establish SciImpact as a challenging benchmark and demonstrate its value for multi-dimensional, multi-field scientific impact prediction.Our project homepage is https://flypig23.github.io/sciimpact-homepage/.
Long-horizon search agents accumulate large amounts of retrieved content across many tool calls, making context-budget efficiency increasingly important. A minimal intervention is to mask stale observations from the context as the trajectory progresses, but it remains unclear when this form of context management helps and why. We study observation masking through a systematic sweep over various agent backbones (4B to 284B parameters) and three retrievers on offline and live-web agentic search benchmarks. We find that the accuracy gain from masking follows an asymmetric inverted-U shape when plotted against the model’s accuracy without context management: a plateau under weak retrievers, a peak in the *mismatch regime* (strong retriever × mid-capacity model), and a sharp collapse when the model is saturated. This pattern reflects the interaction between retriever recall and the model’s implicit filtering capacity, rather than either factor in isolation. Mechanistically, masking implements a token-for-turn trade-off: it removes observations the model has largely stopped attending to and pages the agent rarely re-opens. The added turns help when they convert failures into successes, but they fail when masking removes evidence the model would otherwise have used. We therefore reframe context management as a regime-dependent intervention (rather than a default choice), providing a new, holistic viewpoint that unifies the understanding of agentic deep search.
Training deep research agents requires long-horizon trajectories that interleave search, evidence aggregation, and multi-step reasoning. However, existing data collection pipelines typically rely on proprietary web APIs, making large-scale trajectory synthesis costly, unstable, and difficult to reproduce. We present OpenResearcher, a reproducible pipeline that decouples one-time corpus bootstrapping from multi-turn trajectory synthesis and executes the search-and-browse loop entirely offline using three explicit browser primitives: search, open, and find, over a 15M-document corpus. Using GPT-OSS-120B as the teacher model, we synthesize over 97K trajectories, including a substantial long-horizon tail with 100+ tool calls. Supervised fine-tuning a 30B-A3B backbone on these trajectories achieves 54.8% accuracy on BrowseComp-Plus, an absolute improvement of 34.0 percentage points over the base model, while remaining competitive on BrowseComp, GAIA, and xbench-DeepSearch. Because the environment is offline and fully instrumented, it also enables controlled analysis, where our study reveals practical insights into deep research pipeline design, including data filtering strategies, agent configuration choices, and how retrieval success relates to final answer accuracy.
The rapid rise in AI conference submissions has driven increasing exploration of large language models (LLMs) for peer review support. However, LLM-based reviewers often generate superficial, formulaic comments lacking substantive, evidence-grounded feedback. We attribute this to the underutilization of two key components of human reviewing: explicit rubrics and contextual grounding in existing work. To address this, we introduce ReviewBench, a benchmark evaluating review text according to paper-specific rubrics derived from official guidelines, the paper’s content, and human-written reviews. We further propose ReviewGrounder, a rubric-guided, tool-integrated multi-agent framework that decomposes reviewing into drafting and grounding stages, enriching shallow drafts via targeted evidence consolidation. Experiments on ReviewBench show that ReviewGrounder, using a Phi-4-14B-based drafter and a GPT-OSS-120B-based grounding stage, consistently outperforms baselines with substantially stronger/larger backbones (e.g., GPT-4.1 and DeepSeek-R1-670B) in both alignment with human judgments and rubric-based review quality across 8 dimensions. The code is available at https://github.com/EigenTom/ReviewGrounder.

2025

Protein-specific large language models (ProteinLLMs) are revolutionizing protein science by enabling more efficient protein structure prediction, function annotation, and design. While existing surveys focus on specific aspects or applications, this work provides the first comprehensive overview of ProteinLLMs, covering their architectures, training datasets, evaluation metrics, and diverse applications. Through a systematic analysis of over 100 articles, we propose a structured taxonomy of state-of-the-art ProteinLLMs, analyze how they leverage large-scale protein sequence data for improved accuracy, and explore their potential in advancing protein engineering and biomedical research. Additionally, we discuss key challenges and future directions, positioning ProteinLLMs as essential tools for scientific discovery in protein science. Resources are maintained at https://github.com/Yijia-Xiao/Protein-LLM-Survey.
Entity set expansion, taxonomy expansion, and seed-guided taxonomy construction are three representative tasks that can be applied to automatically populate an existing taxonomy with emerging concepts. Previous studies view them as three separate tasks. Therefore, their proposed techniques usually work for one specific task only, lacking generalizability and a holistic perspective. In this paper, we aim at a unified solution to the three tasks. To be specific, we identify two common skills needed for entity set expansion, taxonomy expansion, and seed-guided taxonomy construction: finding “siblings” and finding “parents”. We propose a taxonomy-guided instruction tuning framework to teach a large language model to generate siblings and parents for query entities, where the joint pre-training process facilitates the mutual enhancement of the two skills. Extensive experiments on multiple benchmark datasets demonstrate the efficacy of our proposed TaxoInstruct framework, which outperforms task-specific baselines across all three tasks.
We investigate the impacts of NLP research published in top-tier conferences (i.e., ACL, EMNLP, and NAACL) from 1979 to 2024. By analyzing citations from research articles and external sources such as patents, media, and policy documents, we examine how different NLP topics are consumed both within the academic community and by the broader public. Our findings reveal that language modeling has the widest internal and external influence, while linguistic foundations have lower impacts. We also observe that internal and external impacts generally align, but topics like ethics, bias, and fairness show significant attention in policy documents with much fewer academic citations. Additionally, external domains exhibit distinct preferences, with patents focusing on practical NLP applications and media and policy documents engaging more with the societal implications of NLP models.

2024

Large language models (LLMs), while exhibiting exceptional performance, suffer from hallucinations, especially on knowledge-intensive tasks. Existing works propose to augment LLMs with individual text units retrieved from external knowledge corpora to alleviate the issue. However, in many domains, texts are interconnected (e.g., academic papers in a bibliographic graph are linked by citations and co-authorships) which form a (text-attributed) graph. The knowledge in such graphs is encoded not only in single texts/nodes but also in their associated connections. To facilitate the research of augmenting LLMs with graphs, we manually construct a Graph Reasoning Benchmark dataset called GRBench, containing 1,740 questions that can be answered with the knowledge from 10 domain graphs. Then, we propose a simple and effective framework called Graph Chain-of-thought (Graph-CoT) to augment LLMs with graphs by encouraging LLMs to reason on the graph iteratively. Each Graph-CoT iteration consists of three sub-steps: LLM reasoning, LLM-graph interaction, and graph execution. We conduct systematic experiments with three LLM backbones on GRBench, where Graph-CoT outperforms the baselines consistently. The code is available at https://github.com/PeterGriffinJin/Graph-CoT/.
In many scientific fields, large language models (LLMs) have revolutionized the way text and other modalities of data (e.g., molecules and proteins) are handled, achieving superior performance in various applications and augmenting the scientific discovery process. Nevertheless, previous surveys on scientific LLMs often concentrate on one or two fields or a single modality. In this paper, we aim to provide a more holistic view of the research landscape by unveiling cross-field and cross-modal connections between scientific LLMs regarding their architectures and pre-training techniques. To this end, we comprehensively survey over 260 scientific LLMs, discuss their commonalities and differences, as well as summarize pre-training datasets and evaluation tasks for each field and modality. Moreover, we investigate how LLMs have been deployed to benefit scientific discovery. Resources related to this survey are available at https://github.com/yuzhimanhua/Awesome-Scientific-Language-Models.

2022

Discovering latent topics from text corpora has been studied for decades. Many existing topic models adopt a fully unsupervised setting, and their discovered topics may not cater to users’ particular interests due to their inability of leveraging user guidance. Although there exist seed-guided topic discovery approaches that leverage user-provided seeds to discover topic-representative terms, they are less concerned with two factors: (1) the existence of out-of-vocabulary seeds and (2) the power of pre-trained language models (PLMs). In this paper, we generalize the task of seed-guided topic discovery to allow out-of-vocabulary seeds. We propose a novel framework, named SeeTopic, wherein the general knowledge of PLMs and the local semantics learned from the input corpus can mutually benefit each other. Experiments on three real datasets from different domains demonstrate the effectiveness of SeeTopic in terms of topic coherence, accuracy, and diversity.