Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
2013-08
Association for Computational Linguistics
Sofia, Bulgaria
text
conference publication
ws-2013-bionlp
https://aclanthology.org/W13-2000
Overview of BioNLP Shared Task 2013
Claire
Nédellec
author
Robert
Bossy
author
Jin-Dong
Kim
author
Jung-jae
Kim
author
Tomoko
Ohta
author
Sampo
Pyysalo
author
Pierre
Zweigenbaum
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
nedellec-etal-2013-overview
https://aclanthology.org/W13-2001
2013-08
1
7
The Genia Event Extraction Shared Task, 2013 Edition - Overview
Jin-Dong
Kim
author
Yue
Wang
author
Yamamoto
Yasunori
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
kim-etal-2013-genia
https://aclanthology.org/W13-2002
2013-08
8
15
TEES 2.1: Automated Annotation Scheme Learning in the BioNLP 2013 Shared Task
Jari
Björne
author
Tapio
Salakoski
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
bjorne-salakoski-2013-tees
https://aclanthology.org/W13-2003
2013-08
16
25
EVEX in ST’13: Application of a large-scale text mining resource to event extraction and network construction
Kai
Hakala
author
Sofie
Van Landeghem
author
Tapio
Salakoski
author
Yves
Van de Peer
author
Filip
Ginter
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
hakala-etal-2013-evex
https://aclanthology.org/W13-2004
2013-08
26
34
Biomedical Event Extraction by Multi-class Classification of Pairs of Text Entities
Xiao
Liu
author
Antoine
Bordes
author
Yves
Grandvalet
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
liu-etal-2013-biomedical
https://aclanthology.org/W13-2006
2013-08
45
49
GRO Task: Populating the Gene Regulation Ontology with events and relations
Jung-jae
Kim
author
Xu
Han
author
Vivian
Lee
author
Dietrich
Rebholz-Schuhmann
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
kim-etal-2013-gro
https://aclanthology.org/W13-2007
2013-08
50
57
Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013
Sampo
Pyysalo
author
Tomoko
Ohta
author
Sophia
Ananiadou
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
pyysalo-etal-2013-overview
https://aclanthology.org/W13-2008
2013-08
58
66
Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013
Tomoko
Ohta
author
Sampo
Pyysalo
author
Rafal
Rak
author
Andrew
Rowley
author
Hong-Woo
Chun
author
Sung-Jae
Jung
author
Sung-Pil
Choi
author
Sophia
Ananiadou
author
Jun’ichi
Tsujii
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
ohta-etal-2013-overview
https://aclanthology.org/W13-2009
2013-08
67
75
Generalizing an Approximate Subgraph Matching-based System to Extract Events in Molecular Biology and Cancer Genetics
Haibin
Liu
author
Karin
Verspoor
author
Donald
C
Comeau
author
Andrew
MacKinlay
author
W
John
Wilbur
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
liu-etal-2013-generalizing
https://aclanthology.org/W13-2010
2013-08
76
85
Performance and limitations of the linguistically motivated Cocoa/Peaberry system in a broad biological domain.
S
V
Ramanan
author
P
Senthil
Nathan
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
ramanan-nathan-2013-performance
https://aclanthology.org/W13-2011
2013-08
86
93
NaCTeM EventMine for BioNLP 2013 CG and PC tasks
Makoto
Miwa
author
Sophia
Ananiadou
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
miwa-ananiadou-2013-nactem
https://aclanthology.org/W13-2012
2013-08
94
98
BioNLP Shared Task 2013: Supporting Resources
Pontus
Stenetorp
author
Wiktoria
Golik
author
Thierry
Hamon
author
Donald
C
Comeau
author
Rezarta
Islamaj Doğan
author
Haibin
Liu
author
W
John
Wilbur
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
stenetorp-etal-2013-bionlp
https://aclanthology.org/W13-2013
2013-08
99
103
A fast rule-based approach for biomedical event extraction
Quoc-Chinh
Bui
author
David
Campos
author
Erik
van Mulligen
author
Jan
Kors
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
bui-etal-2013-fast
https://aclanthology.org/W13-2014
2013-08
104
108
Improving Feature-Based Biomedical Event Extraction System by Integrating Argument Information
Lishuang
Li
author
Yiwen
Wang
author
Degen
Huang
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
li-etal-2013-improving
https://aclanthology.org/W13-2015
2013-08
109
115
UZH in BioNLP 2013
Gerold
Schneider
author
Simon
Clematide
author
Tilia
Ellendorff
author
Don
Tuggener
author
Fabio
Rinaldi
author
Gintarė
Grigonytė
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
schneider-etal-2013-uzh
https://aclanthology.org/W13-2016
2013-08
116
120
A Hybrid approach for biomedical event extraction
Xuan
Quang
Pham
author
Minh
Quang
Le
author
Bao
Quoc
Ho
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
pham-etal-2013-hybrid
https://aclanthology.org/W13-2017
2013-08
121
124
Identification of Genia Events using Multiple Classifiers
Roland
Roller
author
Mark
Stevenson
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
roller-stevenson-2013-identification
https://aclanthology.org/W13-2018
2013-08
125
129
Exploring a Probabilistic Earley Parser for Event Composition in Biomedical Texts
Mai-Vu
Tran
author
Nigel
Collier
author
Hoang-Quynh
Le
author
Van-Thuy
Phi
author
Thanh-Binh
Pham
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
tran-etal-2013-exploring
https://aclanthology.org/W13-2019
2013-08
130
134
Detecting Relations in the Gene Regulation Network
Thomas
Provoost
author
Marie-Francine
Moens
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
provoost-moens-2013-detecting
https://aclanthology.org/W13-2020
2013-08
135
138
Ontology-based semantic annotation: an automatic hybrid rule-based method
Sondes
Bannour
author
Laurent
Audibert
author
Henry
Soldano
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
bannour-etal-2013-ontology
https://aclanthology.org/W13-2021
2013-08
139
143
Building A Contrasting Taxa Extractor for Relation Identification from Assertions: BIOlogical Taxonomy & Ontology Phrase Extraction System
Cyril
Grouin
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
grouin-2013-building
https://aclanthology.org/W13-2022
2013-08
144
152
BioNLP Shared Task 2013 – An overview of the Genic Regulation Network Task
Robert
Bossy
author
Philippe
Bessières
author
Claire
Nédellec
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
bossy-etal-2013-bionlp
https://aclanthology.org/W13-2023
2013-08
153
160
BioNLP shared Task 2013 – An Overview of the Bacteria Biotope Task
Robert
Bossy
author
Wiktoria
Golik
author
Zorana
Ratkovic
author
Philippe
Bessières
author
Claire
Nédellec
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
bossy-etal-2013-bionlp-shared
https://aclanthology.org/W13-2024
2013-08
161
169
Bacteria Biotope Detection, Ontology-based Normalization, and Relation Extraction using Syntactic Rules
İlknur
Karadeniz
author
Arzucan
Özgür
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
karadeniz-ozgur-2013-bacteria
https://aclanthology.org/W13-2025
2013-08
170
177
IRISA participation to BioNLP-ST13: lazy-learning and information retrieval for information extraction tasks
Vincent
Claveau
author
2013-08
text
Proceedings of the BioNLP Shared Task 2013 Workshop
Claire
Nédellec
editor
Robert
Bossy
editor
Jin-Dong
Kim
editor
Jung-jae
Kim
editor
Tomoko
Ohta
editor
Sampo
Pyysalo
editor
Pierre
Zweigenbaum
editor
Association for Computational Linguistics
Sofia, Bulgaria
conference publication
claveau-2013-irisa
https://aclanthology.org/W13-2027
2013-08
188
196