Proceedings of BioNLP 2014

Kevin Cohen, Dina Demner-Fushman, Sophia Ananiadou, Jun-ichi Tsujii (Editors)

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Baltimore, Maryland
Association for Computational Linguistics
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Proceedings of BioNLP 2014
Kevin Cohen | Dina Demner-Fushman | Sophia Ananiadou | Jun-ichi Tsujii

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Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses
Tasnia Tahsin | Robert Rivera | Rachel Beard | Rob Lauder | Davy Weissenbacher | Matthew Scotch | Garrick Wallstrom | Graciela Gonzalez

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Temporal Expression Recognition for Cell Cycle Phase Concepts in Biomedical Literature
Negacy Hailu | Natalya Panteleyeva | Kevin Cohen

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Classifying Negative Findings in Biomedical Publications
Bei Yu | Daniele Fanelli

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Automated Disease Normalization with Low Rank Approximations
Robert Leaman | Zhiyong Lu

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Decomposing Consumer Health Questions
Kirk Roberts | Halil Kilicoglu | Marcelo Fiszman | Dina Demner-Fushman

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Detecting Health Related Discussions in Everyday Telephone Conversations for Studying Medical Events in the Lives of Older Adults
Golnar Sheikhshab | Izhak Shafran | Jeffrey Kaye

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Coreference Resolution for Structured Drug Product Labels
Halil Kilicoglu | Dina Demner-Fushman

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Generating Patient Problem Lists from the ShARe Corpus using SNOMED CT/SNOMED CT CORE Problem List
Danielle Mowery | Mindy Ross | Sumithra Velupillai | Stephane Meystre | Janyce Wiebe | Wendy Chapman

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A System for Predicting ICD-10-PCS Codes from Electronic Health Records
Michael Subotin | Anthony Davis

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Structuring Operative Notes using Active Learning
Kirk Roberts | Sanda Harabagiu | Michael Skinner

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Chunking Clinical Text Containing Non-Canonical Language
Aleksandar Savkov | John Carroll | Jackie Cassell

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Decision Style in a Clinical Reasoning Corpus
Limor Hochberg | Cecilia Ovesdotter Alm | Esa M. Rantanen | Caroline M. DeLong | Anne Haake

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Temporal Expressions in Swedish Medical Text – A Pilot Study
Sumithra Velupillai

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A repository of semantic types in the MIMIC II database clinical notes
Richard Osborne | Alan Aronson | Kevin Cohen

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Extracting drug indications and adverse drug reactions from Spanish health social media
Isabel Segura-Bedmar | Santiago de la Peña González | Paloma Martínez

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Symptom extraction issue
Laure Martin | Delphine Battistelli | Thierry Charnois

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Seeking Informativeness in Literature Based Discovery
Judita Preiss

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Towards Gene Recognition from Rare and Ambiguous Abbreviations using a Filtering Approach
Matthias Hartung | Roman Klinger | Matthias Zwick | Philipp Cimiano

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FFTM: A Fuzzy Feature Transformation Method for Medical Documents
Amir Karami | Aryya Gangopadhyay

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Using statistical parsing to detect agrammatic aphasia
Kathleen C. Fraser | Graeme Hirst | Jed A. Meltzer | Jennifer E. Mack | Cynthia K. Thompson